STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115423130Glutamate receptor U1-like. (461 aa)    
Predicted Functional Partners:
grin1
Glutamate ionotropic receptor NMDA type subunit 1.
   
0.722
scn3b
Sodium voltage-gated channel beta subunit 3.
   
 
  0.715
ENSSORP00005006421
Sodium channel, voltage-gated, type IV, beta a.
     
 0.645
ENSSORP00005036281
annotation not available
  
 
0.553
gria2
Glutamate ionotropic receptor AMPA type subunit 2.
    
0.541
ENSSORP00005037204
annotation not available
    
0.541
ENSSORP00005018598
Glutamate receptor, ionotropic, kainate 4.
  
  
 
0.533
ENSSORP00005021133
Leucine-rich repeats and guanylate kinase domain containing.
   
  0.508
ENSSORP00005027640
Glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca.
    
0.465
ENSSORP00005004162
annotation not available
   
 0.459
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.