STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005007935Kalirin RhoGEF kinase a. (2294 aa)    
Predicted Functional Partners:
RAC1
Rac family small GTPase 1.
   
 0.863
ENSSORP00005031648
Rac family small GTPase 3b.
   
 0.863
RAC1-2
Ras-related C3 botulinum toxin substrate 1.
   
 0.863
rhobtb2
Rho related BTB domain containing 2.
   
 0.840
LOC115433523
Rho-related GTP-binding protein RhoG-like.
   
 0.840
LOC115426990
Rho-related GTP-binding protein RhoG-like.
   
 0.840
LOC115425104
Rho-related BTB domain-containing protein 2-like.
   
 0.840
LOC115419450
Cell division control protein 42 homolog.
   
 0.837
CDC42
Cell division control protein 42 homolog.
   
 0.837
rhof
Ras homolog family member F, filopodia associated.
   
 0.834
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.