STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hoxb9Homeobox B9. (287 aa)    
Predicted Functional Partners:
LOC115423398
Homeobox protein Hox-B5a-like.
   
 
0.867
LOC115410239
Homeobox protein Hox-B6b.
   
 
0.842
ENSSORP00005008892
annotation not available
   
 
0.842
ENSSORP00005008889
Homeobox B7a.
   
 
0.663
LOC115424535
Homeobox protein Hox-B3a.
   
 
0.589
hoxb8
Homeobox B8.
   
 
0.583
hoxc8
Homeobox C8.
   
 
0.583
hoxd4
Homeobox D4.
   
 
0.487
hoxc6
Homeobox C6.
  
 
0.479
hoxc4
Homeobox C4.
   
 
0.466
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.