STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115422865TRAF3-interacting JNK-activating modulator-like. (588 aa)    
Predicted Functional Partners:
tcp1
T-complex 1.
    
   0.949
cct3
Chaperonin containing TCP1 subunit 3.
    
   0.949
cct5
Chaperonin containing TCP1 subunit 5.
    
   0.949
fgfr1op2
FGFR1 oncogene partner 2.
    
 
 0.928
LOC115412761
MOB-like protein phocein.
    
 
 0.927
LOC115431003
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform.
    
 0.915
cct8
Chaperonin containing TCP1 subunit 8.
    
   0.909
pdcd10
Programmed cell death 10.
    
 
 0.889
LOC115413437
Programmed cell death protein 10.
    
 
 0.889
ENSSORP00005010978
Programmed cell death 10b.
    
 
 0.889
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.