STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005009281annotation not available (198 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
    
  0.488
LOC115438809
Ubiquilin-4-like.
    
  0.488
zfand4
Zinc finger AN1-type containing 4.
    
  0.475
LOC115430514
Ubiquitin-conjugating enzyme E2 L3-like.
    
  0.458
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
    
  0.444
ENSSORP00005013645
annotation not available
    
  0.441
ENSSORP00005013665
annotation not available
    
  0.441
ENSSORP00005014917
annotation not available
    
  0.441
ENSSORP00005024962
annotation not available
    
  0.441
LOC115426284
Ubiquitin-like protein 4A.
    
  0.441
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.