STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115421431Mortality factor 4-like protein 1. (323 aa)    
Predicted Functional Partners:
trrap
Transformation/transcription domain associated protein.
   
 0.987
ENSSORP00005042708
MYST/Esa1-associated factor 6.
   
 0.987
actl6a
Actin like 6A.
   
 0.986
yeats4
YEATS domain containing 4.
    
 0.986
dmap1
DNA methyltransferase 1 associated protein 1.
    
 0.985
mrgbp
MRG domain binding protein.
   
 0.984
vps72
Vacuolar protein sorting 72 homolog.
    
 0.981
LOC115438904
Histone H2A.Z.
   
 0.980
ing3
Inhibitor of growth family member 3.
   
 0.979
ENSSORP00005036572
RuvB-like AAA ATPase 2.
   
 0.975
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.