STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115427227DNA-directed RNA polymerases I and III subunit RPAC2-like. (163 aa)    
Predicted Functional Partners:
twistnb
TWIST neighbor.
   
 0.999
polr2h
RNA polymerase II subunit H.
   
 0.999
polr2k
RNA polymerase II subunit K.
   
 0.999
znrd1
Zinc ribbon domain containing 1.
  
 0.999
polr3h
RNA polymerase III subunit H.
  
 0.999
POLR2E
RNA polymerase II subunit E.
  
 0.999
crcp
DNA-directed RNA polymerase III subunit RPC9-like.
   
 0.999
polr2f
RNA polymerase II subunit F.
  
 0.999
polr1b
RNA polymerase I subunit B.
  
 0.999
polr3e
RNA polymerase III subunit E.
   
 0.999
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.