STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCLK2Doublecortin like kinase 2. (717 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2 group IVA.
    
 0.703
calm2
Calmodulin 2.
   
 0.670
calm2-2
Calmodulin 2.
   
 0.670
calm2-3
Calmodulin 3.
   
 0.670
calm2-4
Calmodulin 2.
   
 0.670
CALML6
Calmodulin like 6.
   
 0.662
ENSSORP00005004983
Calmodulin-like 4b.
   
 0.628
ENSSORP00005037132
Calmodulin-like 4a.
   
 0.628
ENSSORP00005021897
annotation not available
   
 0.626
ripk4
Receptor interacting serine/threonine kinase 4.
    
 0.610
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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