STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005011019Si:ch73-199g24.2. (983 aa)    
Predicted Functional Partners:
stx5
Syntaxin 5.
   
 0.960
ENSSORP00005014403
Golgi SNAP receptor complex member 1.
    
 0.872
LOC115433509
Golgi SNAP receptor complex member 1-like.
    
 0.872
ENSSORP00005007228
USO1 vesicle transport factor.
   
 0.848
dctn2
Dynactin subunit 2.
     
 0.755
GORASP2
Golgi reassembly stacking protein 2.
    
 0.750
ENSSORP00005023903
Golgi reassembly stacking protein 2.
    
 0.750
gorasp1
Golgi reassembly stacking protein 1.
    
 0.750
LOC115411739
Golgi reassembly-stacking protein 1-like.
    
 0.750
tmed2
Transmembrane p24 trafficking protein 2.
    
  0.727
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.