STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115418705Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like. (396 aa)    
Predicted Functional Partners:
b4galt2
Beta-1,4-galactosyltransferase 2.
   
 
 0.861
b4galt4
Beta-1,4-galactosyltransferase 4.
   
 
 0.861
LOC115422818
Beta-1,4-galactosyltransferase 3-like.
   
 
 0.861
b4galt1
Beta-1,4-galactosyltransferase 1.
   
 
 0.861
LOC115435169
Beta-1,4-galactosyltransferase 3-like.
   
 
 0.861
LOC115418135
Beta-1,4-galactosyltransferase 6-like.
   
 
 0.860
LOC115410885
Beta-1,4-galactosyltransferase 1-like.
   
 
 0.858
LOC115422596
Beta-1,4-galactosyltransferase 5.
   
 
 0.853
LOC115415338
Beta-1,3-galactosyltransferase 5-like.
  
  
 
0.847
LOC115435550
Beta-1,3-galactosyltransferase 1-like.
   
 
0.843
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.