ASCL4 protein (Sphaeramia orbicularis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

ASCL4

Achaete-scute homolog 4-like. (182 aa)

Predicted Functional Partners:

bhlhe23

0.581

ldb2

0.576

LOC115433974

0.576

LOC115419720

0.576

tcf3

0.575

tcf12

0.575

LOC115436932

0.575

ENSSORP00005041075

0.575

ENSSORP00005041078

0.575

ENSSORP00005041079

0.575

Your Current Organism:

Sphaeramia orbicularis

NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASCL4	ENSSORP00005041075	ENSSORP00005011476	ENSSORP00005041075	Achaete-scute homolog 4-like.	annotation not available	0.575
ASCL4	ENSSORP00005041078	ENSSORP00005011476	ENSSORP00005041078	Achaete-scute homolog 4-like.	annotation not available	0.575
ASCL4	ENSSORP00005041079	ENSSORP00005011476	ENSSORP00005041079	Achaete-scute homolog 4-like.	annotation not available	0.575
ASCL4	LOC115419720	ENSSORP00005011476	ENSSORP00005053801	Achaete-scute homolog 4-like.	LIM domain-binding protein 1.	0.576
ASCL4	LOC115433974	ENSSORP00005011476	ENSSORP00005038845	Achaete-scute homolog 4-like.	LIM domain-binding protein 1-like.	0.576
ASCL4	LOC115436932	ENSSORP00005011476	ENSSORP00005028940	Achaete-scute homolog 4-like.	Transcription factor E2-alpha-like.	0.575
ASCL4	bhlhe23	ENSSORP00005011476	ENSSORP00005025761	Achaete-scute homolog 4-like.	Basic helix-loop-helix family member e23.	0.581
ASCL4	ldb2	ENSSORP00005011476	ENSSORP00005023771	Achaete-scute homolog 4-like.	LIM domain binding 2.	0.576
ASCL4	tcf12	ENSSORP00005011476	ENSSORP00005014413	Achaete-scute homolog 4-like.	Transcription factor 12.	0.575
ASCL4	tcf3	ENSSORP00005011476	ENSSORP00005005328	Achaete-scute homolog 4-like.	Transcription factor 3.	0.575
ENSSORP00005041075	ASCL4	ENSSORP00005041075	ENSSORP00005011476	annotation not available	Achaete-scute homolog 4-like.	0.575
ENSSORP00005041075	LOC115419720	ENSSORP00005041075	ENSSORP00005053801	annotation not available	LIM domain-binding protein 1.	0.712
ENSSORP00005041075	LOC115433974	ENSSORP00005041075	ENSSORP00005038845	annotation not available	LIM domain-binding protein 1-like.	0.712
ENSSORP00005041075	ldb2	ENSSORP00005041075	ENSSORP00005023771	annotation not available	LIM domain binding 2.	0.696
ENSSORP00005041078	ASCL4	ENSSORP00005041078	ENSSORP00005011476	annotation not available	Achaete-scute homolog 4-like.	0.575
ENSSORP00005041078	LOC115419720	ENSSORP00005041078	ENSSORP00005053801	annotation not available	LIM domain-binding protein 1.	0.712
ENSSORP00005041078	LOC115433974	ENSSORP00005041078	ENSSORP00005038845	annotation not available	LIM domain-binding protein 1-like.	0.712
ENSSORP00005041078	ldb2	ENSSORP00005041078	ENSSORP00005023771	annotation not available	LIM domain binding 2.	0.696
ENSSORP00005041079	ASCL4	ENSSORP00005041079	ENSSORP00005011476	annotation not available	Achaete-scute homolog 4-like.	0.575
ENSSORP00005041079	LOC115419720	ENSSORP00005041079	ENSSORP00005053801	annotation not available	LIM domain-binding protein 1.	0.712