STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPPPTubulin polymerization promoting protein. (238 aa)    
Predicted Functional Partners:
SNCA
Alpha-synuclein-like.
   
 
 0.816
dctn2
Dynactin subunit 2.
      
 0.540
dcx
Doublecortin.
      
 0.535
actr10
Actin related protein 10.
      
 0.510
ENSSORP00005048969
Dynactin 1b.
      
 0.481
LOC115438537
Dynactin subunit 1-like.
      
 0.481
ENSSORP00005032741
Synuclein, gamma b (breast cancer-specific protein 1).
   
 
 0.476
ENSSORP00005032742
annotation not available
   
 
 0.476
LOC115434547
Alpha-synuclein-like.
   
 
 0.476
dctn4
Dynactin subunit 4.
      
 0.445
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.