STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115432161mRNA decay activator protein ZFP36L1-like. (435 aa)    
Predicted Functional Partners:
LOC115420632
CCR4-NOT transcription complex subunit 1.
    
 0.935
exosc8
Exosome component 8.
    
  0.890
ENSSORP00005046106
MAPK activated protein kinase 2b.
    
 0.883
ENSSORP00005051690
5'-3' exoribonuclease 1.
    
 0.862
MAPKAPK3
MAPK activated protein kinase 3.
    
 0.860
LOC115419723
MAP kinase-activated protein kinase 2-like.
    
 0.860
LOC115432020
mRNA decay activator protein ZFP36L1-like.
  
  
 
0.855
zfp36l1
ZFP36 ring finger protein like 1.
  
  
 
0.851
ENSSORP00005021171
annotation not available
    
 0.849
zfp36l2
ZFP36 ring finger protein like 2.
  
  
 
0.821
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.