STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dcaf17DDB1 and CUL4 associated factor 17. (511 aa)    
Predicted Functional Partners:
ddb1
Damage specific DNA binding protein 1.
    
 0.950
ambra1
Autophagy and beclin 1 regulator 1.
   
 
  0.927
rbx1
Ring-box 1.
     
 0.925
ENSSORP00005013547
Glomulin, FKBP associated protein a.
   
 
  0.924
dcaf8
DDB1 and CUL4 associated factor 8.
     
 0.923
DDA1
DET1- and DDB1-associated protein 1-like.
    
 0.889
DDA1-2
DET1- and DDB1-associated protein 1.
    
 0.889
cul4a
Cullin 4A.
   
 0.886
ENSSORP00005056781
Cullin 4B.
   
 0.886
LOC115420088
DDB1- and CUL4-associated factor 1-like.
   
 
  0.813
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.