STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005012112annotation not available (99 aa)    
Predicted Functional Partners:
nxf1
Nuclear RNA export factor 1.
   
 0.951
ENSSORP00005031902
SRSF protein kinase 1b.
    
 0.930
ENSSORP00005057380
SRSF protein kinase 1a.
    
 0.929
ncbp2
Nuclear cap binding protein subunit 2.
    
 0.921
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.901
LOC115423813
Serine/arginine-rich splicing factor 2-like.
  
 0.892
cstf3
Cleavage stimulation factor subunit 3.
  
 0.889
LOC115410358
Serine/arginine-rich splicing factor 2-like.
  
 0.889
ALYREF
Aly/REF export factor.
  
 0.881
fip1l1
Factor interacting with PAPOLA and CPSF1.
   
 0.881
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.