STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crtapCartilage associated protein. (396 aa)    
Predicted Functional Partners:
ppib
Peptidylprolyl isomerase B.
   
 0.863
p3h1
Prolyl 3-hydroxylase 1.
   
0.790
p3h2
Prolyl 3-hydroxylase 2.
   
0.789
p3h3
Prolyl 3-hydroxylase 3.
   
0.789
LOC115416760
Peptidyl-prolyl cis-trans isomerase C-like.
   
 0.772
ENSSORP00005008221
annotation not available
   
 0.772
p4hb
Prolyl 4-hydroxylase subunit beta.
   
 
 0.606
LOC115416984
Protein disulfide-isomerase-like.
   
 
 0.606
ENSSORP00005026093
annotation not available
   
 0.599
col6a2
Collagen type VI alpha 2 chain.
   
  0.578
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.