STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005012451annotation not available (134 aa)    
Predicted Functional Partners:
LOC115438898
DNA-directed RNA polymerase II subunit RPB1-like.
    
 
 0.956
tp53
Tumor protein p53.
    
 0.925
ENSSORP00005030057
Interferon regulatory factor 3.
   
 0.882
ENSSORP00005030799
annotation not available
   
 0.882
LOC115425784
Peptidyl-prolyl cis-trans isomerase-like.
  
 0.801
LOC115439502
Peptidyl-prolyl cis-trans isomerase A-like.
  
 0.801
ppia
Peptidylprolyl isomerase A.
  
 0.801
LOC115412982
E3 SUMO-protein ligase RanBP2-like.
  
 0.796
ENSSORP00005023949
Homeodomain interacting protein kinase 2.
    
 0.762
cd164
CD164 molecule.
  
 0.751
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.