STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005012527annotation not available (365 aa)    
Predicted Functional Partners:
ENSSORP00005001606
Translocase of outer mitochondrial membrane 20.
    
  0.801
ENSSORP00005032619
AT rich interactive domain 4A (RBP1-like).
    
  0.801
ENSSORP00005035149
annotation not available
    
  0.801
ENSSORP00005058257
Neogenin 1b.
    
  0.759
ENSSORP00005006880
Usher syndrome 1C.
   
 0.739
LOC115416617
Usher syndrome type-1G protein homolog.
   
 0.699
ush1g
USH1 protein network component sans.
   
 0.699
anks4b
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.699
ENSSORP00005057569
Myosin IHa.
 
      0.679
ENSSORP00005044574
Immunoglobulin superfamily, DCC subclass, member 4.
    
  0.656
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.