STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptpmt1Protein tyrosine phosphatase mitochondrial 1. (201 aa)    
Predicted Functional Partners:
ENSSORP00005023947
TAM41 mitochondrial translocator assembly and maintenance homolog.
      
 0.609
ndufs3
NADH:ubiquinone oxidoreductase core subunit S3.
 
 
 
 0.539
pgs1
Phosphatidylglycerophosphate synthase 1.
      
 0.535
crls1
Cardiolipin synthase 1.
      
 0.525
taz
Tafazzin.
      
 0.520
acp1
Acid phosphatase 1.
      
 0.499
mrps7
Mitochondrial ribosomal protein S7.
   
    0.497
atpaf1
ATP synthase mitochondrial F1 complex assembly factor 1.
      
 0.485
LOC115428697
Biogenesis of lysosome-related organelles complex 1 subunit 4-like.
      
 0.433
agpat5
1-acylglycerol-3-phosphate O-acyltransferase 5.
      
 0.430
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.