STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115438496Matrix metalloproteinase-14-like. (562 aa)    
Predicted Functional Partners:
mmp2
Matrix metallopeptidase 2.
   
 
0.861
mmp14
Matrix metallopeptidase 14.
  
  
 
0.840
ENSSORP00005004208
Ubiquitin-conjugating enzyme E2 variant 1.
   
 
  0.836
mmp15
Matrix metallopeptidase 15.
  
  
 
0.832
TIMP2
TIMP metallopeptidase inhibitor 2.
    
 0.752
LOC115424576
Metalloproteinase inhibitor 2-like.
    
 0.747
TIMP3
Metalloproteinase inhibitor 3-like.
    
 0.722
LOC115432520
Collagenase 3-like.
  
 
0.697
ENSSORP00005003495
annotation not available
  
 
0.697
mmp13
Matrix metallopeptidase 13.
  
 
0.696
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.