STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115428592Protein PRRC2A-like. (1925 aa)    
Predicted Functional Partners:
ENSSORP00005032911
Adaptor related protein complex 2 subunit alpha 1.
   
 
  0.888
ap3d1
Adaptor related protein complex 3 subunit delta 1.
   
 
  0.882
ap2m1
Adaptor related protein complex 2 subunit mu 1.
     
 0.869
LOC115432215
Protein SON-like.
   
 
  0.787
eif3h
Eukaryotic translation initiation factor 3 subunit H.
    
 
 0.718
LOC115437132
AP-1 complex subunit gamma-1-like.
   
 
  0.710
ap1g1
Adaptor related protein complex 1 subunit gamma 1.
   
 
  0.710
ENSSORP00005049267
Adaptor related protein complex 4 subunit epsilon 1.
   
 
  0.710
LOC115415041
RNA-binding protein 25-like.
   
    0.658
ENSSORP00005048013
RNA binding motif protein 25a.
   
    0.658
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.