STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpap2RNA polymerase II associated protein 2. (610 aa)    
Predicted Functional Partners:
polr2d
RNA polymerase II subunit D.
    
 0.993
ENSSORP00005016300
Polymerase (RNA) II (DNA directed) polypeptide G-like.
    
 0.992
polr2j
RNA polymerase II subunit J.
    
 0.992
POLR2E
RNA polymerase II subunit E.
    
 0.992
polr2b
RNA polymerase II subunit B.
   
 0.992
polr2h
RNA polymerase II subunit H.
    
 0.989
polr2i
RNA polymerase II subunit I.
   
 0.989
LOC115438898
DNA-directed RNA polymerase II subunit RPB1-like.
    
 0.989
polr2f
RNA polymerase II subunit F.
    
 0.987
polr2k
RNA polymerase II subunit K.
    
 0.986
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
Server load: low (16%) [ZH]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.