STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tpcn2Two pore segment channel 2. (765 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.998
tpcn1
Two pore segment channel 1.
    
0.899
LOC115434926
Two pore calcium channel protein 2-like.
    
0.894
LOC115411121
ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1-like.
     
 0.845
ENSSORP00005052800
WD repeat domain 35.
    
 0.808
IFT122
Intraflagellar transport 122.
   
 0.804
ENSSORP00005051106
annotation not available
    
 0.791
LOC115424456
Voltage-dependent calcium channel gamma-1 subunit-like.
    
 0.713
cacng1
Calcium voltage-gated channel auxiliary subunit gamma 1.
    
 0.713
ENSSORP00005045520
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.694
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.