STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005014020Synaptoporin. (308 aa)    
Predicted Functional Partners:
ENSSORP00005022286
Zgc:92912.
   
 0.638
LOC115433372
Vesicle-associated membrane protein 2.
   
 0.638
ENSSORP00005030528
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
     
 0.611
VAMP3
Vesicle-associated membrane protein 3-like.
   
 0.562
nans
N-acetylneuraminate synthase.
     
 0.535
LOC115429355
Sialic acid synthase-like.
     
 0.535
ENSSORP00005054921
annotation not available
     
 0.532
nagk
N-acetylglucosamine kinase.
     
 0.532
hoga1
4-hydroxy-2-oxoglutarate aldolase 1.
   
 
  0.524
npl
N-acetylneuraminate pyruvate lyase.
   
 
  0.524
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.