STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005015098annotation not available (115 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.681
eci2
enoyl-CoA delta isomerase 2.
    
  0.618
mars1
methionyl-tRNA synthetase 1.
   
 0.589
ENSSORP00005046001
WD repeat domain 90.
    
 0.587
gak
Cyclin G associated kinase.
   
 0.584
pla2g4a
Phospholipase A2 group IVA.
    
 0.568
ENSSORP00005024951
TNF receptor-associated factor 7.
    
  0.563
ubxn7
UBX domain protein 7.
    
 0.552
acp5
Acid phosphatase 5, tartrate resistant.
   
 0.538
ENSSORP00005042802
annotation not available
    
 0.535
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.