STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005015138annotation not available (120 aa)    
Predicted Functional Partners:
VAMP3
Vesicle-associated membrane protein 3-like.
    
 0.926
vamp4
Vesicle associated membrane protein 4.
    
 0.926
ENSSORP00005022286
Zgc:92912.
    
 0.922
LOC115433372
Vesicle-associated membrane protein 2.
    
 0.922
LOC115429187
Vesicle-associated membrane protein 8-like.
    
 0.922
ENSSORP00005054626
Synaptosome associated protein 23.1.
   
 0.914
ENSSORP00005041619
N-ethylmaleimide-sensitive factor b.
    
 0.881
ykt6
YKT6 v-SNARE homolog.
    
 0.858
vamp7
Vesicle associated membrane protein 7.
    
 0.840
stx16
Syntaxin 16.
    
 0.827
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.