STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acheAcetylcholinesterase (Cartwright blood group). (626 aa)    
Predicted Functional Partners:
gpcpd1
Glycerophosphocholine phosphodiesterase 1.
    
 0.843
LOC115430362
Glycerophosphocholine phosphodiesterase GPCPD1-like.
    
 0.843
ENSSORP00005029244
annotation not available
   
 0.820
dhcr7
7-dehydrocholesterol reductase.
     
 0.768
agk
Acylglycerol kinase.
  
 
  0.761
ENSSORP00005049774
24-dehydrocholesterol reductase.
    
 0.761
LOC115419913
Ghrelin-like.
   
 
 0.660
ENSSORP00005040400
Ribosomal protein S7.
    
 0.634
LOC115430583
Peripheral plasma membrane protein CASK-like.
    
 0.626
cask
Calcium/calmodulin dependent serine protein kinase.
    
 0.626
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.