STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115424494Tumor necrosis factor ligand superfamily member 14-like. (255 aa)    
Predicted Functional Partners:
ENSSORP00005006213
annotation not available
   
 
  0.831
LOC115434986
Tumor necrosis factor receptor superfamily member 6B-like.
   
 
  0.830
LOC115427876
Tumor necrosis factor receptor superfamily member 6B-like.
   
 
  0.822
LOC115427264
Tumor necrosis factor ligand superfamily member 15-like.
     
 0.802
tnfrsf9
TNF receptor superfamily member 9.
   
 
  0.776
LOC115435043
Tumor necrosis factor receptor superfamily member 5-like.
   
 
  0.776
ENSSORP00005039813
CD40 molecule, TNF receptor superfamily member 5.
   
 
  0.707
ENSSORP00005033706
annotation not available
   
 
  0.594
TNFRSF11B
TNF receptor superfamily member 11b.
   
 
  0.550
tnfsf13b
TNF superfamily member 13b.
   
 
 0.424
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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