STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005015749annotation not available (431 aa)    
Predicted Functional Partners:
becn1
Beclin 1.
    
 0.929
atg13
Autophagy related 13.
     
 0.900
tp53inp2
Tumor protein p53 inducible nuclear protein 2.
     
 0.866
tp53inp1
Tumor protein p53 inducible nuclear protein 1.
     
 0.847
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 
 0.574
ENSSORP00005030858
Transmembrane protein 64.
    
 0.523
atg12
Autophagy related 12.
      
 0.512
atg9a
Autophagy related 9A.
      
 0.506
atg5
Autophagy related 5.
      
 0.497
atg7
Autophagy related 7.
   
  
 0.495
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.