STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctsoCathepsin O. (340 aa)    
Predicted Functional Partners:
LOC115432031
Dipeptidyl peptidase 1-like.
   
0.866
ctsc
Cathepsin C.
   
0.866
LOC115415203
Cathepsin B-like.
  
0.866
LOC115416194
Cathepsin B-like.
   
0.856
LOC115420353
Pro-cathepsin H-like.
  
0.846
LOC115426715
Cathepsin F-like.
  
  
 
0.845
CTSH
Pro-cathepsin H-like.
  
0.845
LOC115422958
Baculoviral IAP repeat-containing protein 5.1-like.
     
 0.842
LOC115432966
Inhibitor of apoptosis protein-like.
     
 0.842
LOC115410291
Baculoviral IAP repeat-containing protein 5.2-like.
     
 0.842
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.