STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ncf4Neutrophil cytosolic factor 4. (349 aa)    
Predicted Functional Partners:
ncf1
Neutrophil cytosolic factor 1.
   
 0.998
ncf2
Neutrophil cytosolic factor 2.
   
0.996
ENSSORP00005010527
NADPH oxidase activator 1.
   
 0.995
LOC115417245
Cytochrome b-245 light chain.
   
 0.978
ENSSORP00005044716
annotation not available
   
 0.968
RAC1
Rac family small GTPase 1.
   
 0.924
ENSSORP00005031648
Rac family small GTPase 3b.
   
 0.924
RAC1-2
Ras-related C3 botulinum toxin substrate 1.
   
 0.924
LOC115415882
Cytochrome b-245 heavy chain.
   
 0.906
duox1
Dual oxidase 1.
   
 0.900
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.