cbx6 protein (Sphaeramia orbicularis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

cbx6

Chromobox 6. (512 aa)

Predicted Functional Partners:

pcgf2

0.968

ENSSORP00005039057

0.968

RING1

0.926

ENSSORP00005047032

0.926

LOC115416238

0.926

ENSSORP00005051718

0.926

eed

0.918

LOC115425468

0.908

LOC115424296

0.908

pcgf5

0.907

Your Current Organism:

Sphaeramia orbicularis

NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSORP00005039057	ENSSORP00005047032	ENSSORP00005039057	ENSSORP00005047032	Bmi1 polycomb ring finger oncogene 1a.	annotation not available	0.947
ENSSORP00005039057	ENSSORP00005051718	ENSSORP00005039057	ENSSORP00005051718	Bmi1 polycomb ring finger oncogene 1a.	annotation not available	0.947
ENSSORP00005039057	LOC115416238	ENSSORP00005039057	ENSSORP00005047040	Bmi1 polycomb ring finger oncogene 1a.	E3 ubiquitin-protein ligase RING2.	0.947
ENSSORP00005039057	LOC115424296	ENSSORP00005039057	ENSSORP00005052001	Bmi1 polycomb ring finger oncogene 1a.	E3 SUMO-protein ligase CBX4-like.	0.936
ENSSORP00005039057	LOC115425468	ENSSORP00005039057	ENSSORP00005007464	Bmi1 polycomb ring finger oncogene 1a.	E3 SUMO-protein ligase CBX4-like.	0.936
ENSSORP00005039057	RING1	ENSSORP00005039057	ENSSORP00005007310	Bmi1 polycomb ring finger oncogene 1a.	Ring finger protein 1.	0.947
ENSSORP00005039057	cbx6	ENSSORP00005039057	ENSSORP00005016813	Bmi1 polycomb ring finger oncogene 1a.	Chromobox 6.	0.968
ENSSORP00005039057	eed	ENSSORP00005039057	ENSSORP00005023201	Bmi1 polycomb ring finger oncogene 1a.	Embryonic ectoderm development.	0.904
ENSSORP00005039057	pcgf5	ENSSORP00005039057	ENSSORP00005017855	Bmi1 polycomb ring finger oncogene 1a.	Polycomb group ring finger 5.	0.868
ENSSORP00005047032	ENSSORP00005039057	ENSSORP00005047032	ENSSORP00005039057	annotation not available	Bmi1 polycomb ring finger oncogene 1a.	0.947
ENSSORP00005047032	LOC115424296	ENSSORP00005047032	ENSSORP00005052001	annotation not available	E3 SUMO-protein ligase CBX4-like.	0.869
ENSSORP00005047032	LOC115425468	ENSSORP00005047032	ENSSORP00005007464	annotation not available	E3 SUMO-protein ligase CBX4-like.	0.869
ENSSORP00005047032	cbx6	ENSSORP00005047032	ENSSORP00005016813	annotation not available	Chromobox 6.	0.926
ENSSORP00005047032	eed	ENSSORP00005047032	ENSSORP00005023201	annotation not available	Embryonic ectoderm development.	0.871
ENSSORP00005047032	pcgf2	ENSSORP00005047032	ENSSORP00005002676	annotation not available	Polycomb group ring finger 2.	0.937
ENSSORP00005047032	pcgf5	ENSSORP00005047032	ENSSORP00005017855	annotation not available	Polycomb group ring finger 5.	0.950
ENSSORP00005051718	ENSSORP00005039057	ENSSORP00005051718	ENSSORP00005039057	annotation not available	Bmi1 polycomb ring finger oncogene 1a.	0.947
ENSSORP00005051718	LOC115424296	ENSSORP00005051718	ENSSORP00005052001	annotation not available	E3 SUMO-protein ligase CBX4-like.	0.869
ENSSORP00005051718	LOC115425468	ENSSORP00005051718	ENSSORP00005007464	annotation not available	E3 SUMO-protein ligase CBX4-like.	0.869
ENSSORP00005051718	cbx6	ENSSORP00005051718	ENSSORP00005016813	annotation not available	Chromobox 6.	0.926