STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pih1d2PIH1 domain containing 2. (318 aa)    
Predicted Functional Partners:
ruvbl1
RuvB like AAA ATPase 1.
   
 0.996
ENSSORP00005036572
RuvB-like AAA ATPase 2.
   
 0.996
rpap3
RNA polymerase II associated protein 3.
   
 0.985
nop58
NOP58 ribonucleoprotein.
    
 0.982
ENSSORP00005022019
PIH1 domain containing 1.
     
 0.961
POLR2E
RNA polymerase II subunit E.
    
 0.951
stip1
Stress induced phosphoprotein 1.
    
 0.951
uxt
Ubiquitously expressed prefoldin like chaperone.
    
 0.946
pdrg1
P53 and DNA damage regulated 1.
    
 0.942
uri1
URI1 prefoldin like chaperone.
    
 0.940
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.