STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005016937annotation not available (149 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
    
  0.874
ENSSORP00005036459
annotation not available
    
 0.855
ENSSORP00005004208
Ubiquitin-conjugating enzyme E2 variant 1.
     
 0.837
LOC115429578
Heme-binding protein 1-like.
    
 0.795
rag2
Recombination activating 2.
   
 0.776
pla2g4a
Phospholipase A2 group IVA.
     
 0.770
lyrm4
LYR motif-containing protein 4B-like.
    
 0.726
ENSSORP00005034982
Si:ch211-152c8.4.
    
 0.726
babam1
BRISC and BRCA1 A complex member 1.
    
 0.683
rpl8
Ribosomal protein L8.
   
 
 0.664
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.