STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl35Mitochondrial ribosomal protein L35. (176 aa)    
Predicted Functional Partners:
mrpl15
Mitochondrial ribosomal protein L15.
   
   0.991
mrpl13
Mitochondrial ribosomal protein L13.
   
 
 0.986
mrpl20
Mitochondrial ribosomal protein L20.
   
 
 0.983
mrps14
Mitochondrial ribosomal protein S14.
   
   0.982
mrpl51
Mitochondrial ribosomal protein L51.
   
 
 0.979
ndufab1
NADH:ubiquinone oxidoreductase subunit AB1.
   
   0.977
mrpl32
Mitochondrial ribosomal protein L32.
   
   0.976
mrpl9
Mitochondrial ribosomal protein L9.
   
   0.970
ENSSORP00005043518
Mitochondrial ribosomal protein S28.
   
   0.969
mrpl30
Mitochondrial ribosomal protein L30.
   
 
 0.966
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
Server load: low (22%) [ZH]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.