STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005018698Zinc finger DHHC-type containing 23a. (364 aa)    
Predicted Functional Partners:
ENSSORP00005037381
Protection of telomeres 1 homolog.
    
 0.638
LOC115421656
Uncharacterized LOC115421656.
    
 0.601
rad50
RAD50 double strand break repair protein.
    
 0.550
coq3
Coenzyme Q3, methyltransferase.
     
 0.535
ENSSORP00005012418
Nibrin.
    
  0.520
mre11
MRE11 homolog, double strand break repair nuclease.
    
  0.516
ENSSORP00005028508
annotation not available
    
 0.498
LOC115419219
Golgin subfamily A member 7-like.
    
 0.489
GOLGA7
Golgin A7.
    
 0.489
GOLGA7B
Golgin A7 family member B.
    
 0.489
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.