STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gm2aGM2 ganglioside activator. (195 aa)    
Predicted Functional Partners:
LOC115421617
Beta-hexosaminidase subunit alpha-like.
    
 0.791
hexb
Hexosaminidase subunit beta.
    
 0.791
ENSSORP00005054132
Family with sequence similarity 149 member B1.
    
 0.765
npc2
NPC intracellular cholesterol transporter 2.
   
  
 0.541
sptlc1
Serine palmitoyltransferase long chain base subunit 1.
   
  
 0.538
etfa
Electron transfer flavoprotein subunit alpha.
      
 0.537
ENSSORP00005025365
Galactosamine (N-acetyl)-6-sulfatase.
      
 0.524
LOC115420896
Oxysterol-binding protein-related protein 5-like.
      
 0.493
OSBPL8
Oxysterol binding protein like 8.
      
 0.493
LOC115432375
Neuferricin.
      
 0.465
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.