STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115419120Rho GTPase-activating protein 39-like. (1143 aa)    
Predicted Functional Partners:
ENSSORP00005021452
annotation not available
    
  0.737
ENSSORP00005049142
Capping actin protein of muscle Z-line subunit beta.
    
 0.698
rhof
Ras homolog family member F, filopodia associated.
    
  0.697
LOC115419450
Cell division control protein 42 homolog.
    
 0.645
CDC42
Cell division control protein 42 homolog.
    
 0.645
ENSSORP00005029973
Rho GTPase activating protein 1.
     
 0.641
ENSSORP00005020625
Zgc:123107.
   
  0.632
LOC115413311
lamin-L(III)-like.
    
  0.624
LOC115418536
lamin-B2-like.
    
  0.624
LOC115428924
lamin-A-like.
    
  0.624
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.