STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005019107annotation not available (220 aa)    
Predicted Functional Partners:
ENSSORP00005026502
Protocadherin-related 15a.
   
 0.757
ENSSORP00005041761
Protocadherin-related 15b.
   
 0.757
ENSSORP00005016296
Transmembrane inner ear.
     
 0.620
CDH8
Cadherin-8-like.
   
 0.574
ENSSORP00005030509
annotation not available
   
 
 0.541
TMC1
Transmembrane channel like 1.
   
 
 0.541
ENSSORP00005041222
Calcium and integrin binding family member 3.
   
 
 0.504
ENSSORP00005056677
Calcium and integrin binding family member 2.
   
 
 0.504
CIB2
Calcium and integrin binding family member 2.
   
 
 0.499
ENSSORP00005023314
annotation not available
   
 0.488
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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