STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gatbglutamyl-tRNA amidotransferase subunit B. (550 aa)    
Predicted Functional Partners:
dars2
aspartyl-tRNA synthetase 2, mitochondrial.
 
 0.999
qrsl1
glutaminyl-tRNA amidotransferase subunit QRSL1.
 
 0.999
faah
Fatty acid amide hydrolase.
 
 0.998
faah2
Fatty acid amide hydrolase 2.
  
 0.998
ENSSORP00005042518
glutamyl-prolyl-tRNA synthetase 1.
  
 0.990
qars1
glutaminyl-tRNA synthetase 1.
  
 0.983
ears2
glutamyl-tRNA synthetase 2, mitochondrial.
  
 0.980
ENSSORP00005006312
Guanine monophosphate synthase.
  
 
 0.977
ENSSORP00005002974
annotation not available
  
 0.976
ENSSORP00005031426
annotation not available
  
 0.976
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.