STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115428732Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like. (1084 aa)    
Predicted Functional Partners:
ENSSORP00005002226
Protein phosphatase 6, catalytic subunit.
   
 0.804
PPP6C
Protein phosphatase 6 catalytic subunit.
   
 0.804
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.765
ppp6r3
Protein phosphatase 6 regulatory subunit 3.
    
 0.730
ENSSORP00005045977
Protein phosphatase 6, regulatory subunit 2b.
    
 0.730
LOC115429486
Serine/threonine-protein phosphatase 6 regulatory subunit 2-like.
    
 0.730
acp5
Acid phosphatase 5, tartrate resistant.
   
 0.628
rps3
Ribosomal protein S3.
    
 0.625
ENSSORP00005022929
S-phase kinase-associated protein 1.
   
 0.625
LOC115426950
F-box/WD repeat-containing protein 11.
    
 0.619
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.