STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115417843Cytochrome c oxidase assembly factor 7. (230 aa)    
Predicted Functional Partners:
erlec1
Endoplasmic reticulum lectin 1.
   
 0.922
os9
OS9 endoplasmic reticulum lectin.
   
 0.922
derl2
Derlin 2.
   
 0.911
derl1
Derlin 1.
   
 0.911
syvn1
Synoviolin 1.
    
 0.800
amfr
Autocrine motility factor receptor.
    
 0.800
ube2g2
Ubiquitin conjugating enzyme E2 G2.
    
 0.785
chfr
Checkpoint with forkhead and ring finger domains.
    
 0.773
rnf145
Ring finger protein 145.
    
 0.773
ENSSORP00005036453
annotation not available
    
 0.773
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.