STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005020659annotation not available (171 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
    
  0.995
ENSSORP00005052715
Signal recognition particle 14.
   
 0.993
srp9
Signal recognition particle 9.
   
 0.992
srp68
Signal recognition particle 68.
    
 0.990
srp54
Signal recognition particle 54.
   
 0.990
ENSSORP00005024618
Signal recognition particle 72.
    
 0.973
LOC115426947
Signal recognition particle subunit SRP72-like.
    
 0.973
srpra
SRP receptor subunit alpha.
   
 
 0.946
rpl23a
Ribosomal protein L23a.
   
 0.928
ENSSORP00005036980
SRP receptor subunit beta.
   
 
 0.928
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.