STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005021281annotation not available (182 aa)    
Predicted Functional Partners:
ndc80
NDC80 kinetochore complex component.
   
 
 0.857
ENSSORP00005008013
annotation not available
   
  
 0.737
nup133
Nucleoporin 133.
    
 0.689
nup107
Nucleoporin 107.
   
 0.672
nusap1
Nucleolar and spindle associated protein 1.
   
  
 0.667
ttk
TTK protein kinase.
   
  
 0.664
ska1
Spindle and kinetochore associated complex subunit 1.
   
 
 0.650
ENSSORP00005011807
Spindle and kinetochore associated complex subunit 2.
   
 
 0.631
ENSSORP00005052994
Membrane bound O-acyltransferase domain containing 2a.
   
 
 0.625
LOC115429810
1-acyl-sn-glycerol-3-phosphate acyltransferase alpha-like.
     
 0.612
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.