STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115412513Hereditary hemochromatosis protein homolog. (346 aa)    
Predicted Functional Partners:
LOC115430460
Beta-2-microglobulin-like.
    
  0.821
LOC115428087
Protein disulfide-isomerase A3-like.
    
  0.794
ENSSORP00005026461
Protein disulfide isomerase family A, member 3.
    
  0.794
ENSSORP00005035234
Calreticulin.
     
 0.772
LOC115437793
Calreticulin-like.
     
 0.772
ENSSORP00005055381
annotation not available
     
 0.772
ENSSORP00005049858
Myb-like, SWIRM and MPN domains 1.
    
 0.717
LOC115430664
Beta-2-microglobulin-like.
    
  0.699
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.697
ENSSORP00005039031
Protein disulfide isomerase family A, member 4.
    
  0.647
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.