STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005021450annotation not available (250 aa)    
Predicted Functional Partners:
ENSSORP00005021452
annotation not available
 
 
0.771
wdr18
WD repeat domain 18.
   
 0.757
ENSSORP00005030705
annotation not available
 
      0.726
ENSSORP00005023021
Testis expressed 10.
   
 0.685
ENSSORP00005057825
Pescadillo.
   
 0.660
LOC115411917
Myosin light chain 1, skeletal muscle isoform.
   
 0.642
ENSSORP00005020625
Zgc:123107.
   
  0.632
CALML6
Calmodulin like 6.
    
 0.624
ENSSORP00005004138
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
 0.622
ENSSORP00005053955
Myosin light chain, phosphorylatable, fast skeletal muscle b.
   
 0.622
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.