STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005021727Zinc finger, MYND-type containing 10. (428 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.998
ENSSORP00005052800
WD repeat domain 35.
    
 0.808
IFT122
Intraflagellar transport 122.
   
 0.806
ENSSORP00005051106
annotation not available
    
 0.792
ENSSORP00005039960
Leucine rich repeat containing 6.
    
 0.728
ENSSORP00005045520
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.694
ENSSORP00005045523
annotation not available
    
 0.694
ENSSORP00005009346
Dynein, axonemal, assembly factor 1.
  
 
 0.684
LOC115424456
Voltage-dependent calcium channel gamma-1 subunit-like.
    
 0.675
cacng1
Calcium voltage-gated channel auxiliary subunit gamma 1.
    
 0.675
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.