STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005021792annotation not available (559 aa)    
Predicted Functional Partners:
cpsf2
Cleavage and polyadenylation specific factor 2.
   
 0.796
cpsf1
Cleavage and polyadenylation specific factor 1.
    
 0.775
cstf2
Cleavage stimulation factor subunit 2.
    
 0.773
cstf1
Cleavage stimulation factor subunit 1.
   
 
 0.710
csnk1a1
Casein kinase 1 alpha 1.
     
 0.708
nudt21
Nudix hydrolase 21.
   
 
  0.700
ENSSORP00005030445
Cleavage and polyadenylation specific factor 3.
    
 0.691
CPSF3
Cleavage and polyadenylation specific factor 3.
    
 0.691
calcoco2
Calcium binding and coiled-coil domain 2.
    
 
 0.677
ENSSORP00005051665
ATR serine/threonine kinase.
    
  0.637
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.