STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115424627SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like. (481 aa)    
Predicted Functional Partners:
smarcd2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2.
   
 0.993
ENSSORP00005057693
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2.
    
 0.993
smarcc1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1.
    
 0.992
ENSSORP00005019154
AT rich interactive domain 2 (ARID, RFX-like).
   
 0.992
smarcd1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.
   
 0.992
phf10
PHD finger protein 10.
   
 0.992
ENSSORP00005049858
Myb-like, SWIRM and MPN domains 1.
    
 0.991
ENSSORP00005051945
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b.
   
 0.991
brd7
Bromodomain containing 7.
   
 0.990
actl6a
Actin like 6A.
    
 0.988
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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