STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
timm50Translocase of inner mitochondrial membrane 50. (390 aa)    
Predicted Functional Partners:
ENSSORP00005002481
Translocase of inner mitochondrial membrane 23 homolog a (yeast).
    
 0.998
timm21
Translocase of inner mitochondrial membrane 21.
    
 0.996
ENSSORP00005016088
Translocase of inner mitochondrial membrane 17 homolog B (yeast).
   
 0.986
ENSSORP00005024542
Translocase of inner mitochondrial membrane 17 homolog A (yeast).
   
 0.986
pikfyve
Phosphoinositide kinase, FYVE-type zinc finger containing.
    
 0.978
hspa9
Heat shock protein family A (Hsp70) member 9.
   
 0.975
grpel1
GrpE like 1, mitochondrial.
   
 0.974
romo1
Reactive oxygen species modulator 1.
   
 
 0.971
timm44
Translocase of inner mitochondrial membrane 44.
   
 0.960
TIMM44
Mitochondrial import inner membrane translocase subunit TIM44-like.
   
 0.960
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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